Flexible, user-friendly genomic data visualization toolkit.
- Multi-omics data interactively visualization.
- User-friendly API (ggplot2-like Python EDSL) and CLI.
- Show within Jupyter notebook.
- Ease to fetch data and in cooperation with other Python package.
- Ease to implement/add custom track and integrate into CoolBox.
More details please read the documentation. Interactively online demo: binder
See CONTRIBUTING.md
@article{xu2021coolbox,
title={CoolBox: A flexible toolkit for visual analysis of genomics data},
author={Xu, Weize and Zhong, Quan and Lin, Da and Zuo, Ya and Dai, Jinxia and Li, Guoliang and Cao, Gang},
journal={BMC bioinformatics},
volume={22},
number={1},
pages={1--9},
year={2021},
publisher={Springer}
}
- pyGenomeTracks, CoolBox's plot system is fork from it.
This project exists thanks to all the people who contribute.